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<p class="MsoNormal">Hi all,<o:p></o:p></p>
<p class="MsoNormal"><o:p> </o:p></p>
<p class="MsoNormal">Thanks Dick and John for sending your use cases and straw men!<o:p></o:p></p>
<p class="MsoNormal"><o:p> </o:p></p>
<p class="MsoNormal">Here are a couple more docs I found from our discussions in the past:<o:p></o:p></p>
<ol style="margin-top:0in" start="1" type="1">
<li class="MsoListParagraph" style="margin-left:0in;mso-list:l1 level1 lfo4">Straw man from Anh Vo (mpi_debugging_requirements-AV-05-10-2016)<o:p></o:p></li><li class="MsoListParagraph" style="margin-left:0in;mso-list:l1 level1 lfo4">Needs from Allinea debugger as described by Chris January (mpi_debugging_requirements (002))<o:p></o:p></li><li class="MsoListParagraph" style="margin-left:0in;mso-list:l1 level1 lfo4">Notes from Forum meeting 2/27/2017:
<a href="https://github.com/mpiwg-tools/tools-issues/wiki/Notes-2017-02-27">https://github.com/mpiwg-tools/tools-issues/wiki/Notes-2017-02-27</a><o:p></o:p></li></ol>
<p class="MsoNormal"><o:p> </o:p></p>
<p class="MsoNormal">Talk to you all soon!<o:p></o:p></p>
<p class="MsoNormal">Kathryn<o:p></o:p></p>
<p class="MsoNormal"><o:p> </o:p></p>
<div>
<div style="border:none;border-top:solid #E1E1E1 1.0pt;padding:3.0pt 0in 0in 0in">
<p class="MsoNormal"><b>From:</b> mpiwg-tools <mpiwg-tools-bounces@lists.mpi-forum.org>
<b>On Behalf Of </b>Dirk Schubert via mpiwg-tools<br>
<b>Sent:</b> Thursday, March 21, 2019 3:43 AM<br>
<b>To:</b> mpiwg-tools@lists.mpi-forum.org<br>
<b>Cc:</b> Dirk Schubert <Dirk.Schubert@arm.com><br>
<b>Subject:</b> Re: [mpiwg-tools] Meeting March 21, 2019<o:p></o:p></p>
</div>
</div>
<p class="MsoNormal"><o:p> </o:p></p>
<div id="divtagdefaultwrapper">
<p><span style="font-size:12.0pt;color:black">Hi Kathryn,<o:p></o:p></span></p>
<p><span style="font-size:12.0pt;color:black"><o:p> </o:p></span></p>
<div>
<p class="MsoNormal" style="margin-bottom:12.0pt"><span style="font-size:12.0pt;color:black">The following use cases are important for Arm Forge (debugger DDT and profiler MAP).
<br>
<br>
<b>Use case 1: Launch an MPI job under the control of a tool. </b><br>
<br>
<i>Input:</i> The user's regular command line to start the MPI job, for example "mpirun -n 256 ./wave_c". Why? To make it as friction-less as possible to use a tool.
<br>
<br>
NB: The tool does not want to parse or interpret the MPI starter arguments, as the tool has no knowledge of all possible MPI starter arguments.
<br>
<br>
<i>Requirements: </i><o:p></o:p></span></p>
<ul type="disc">
<li class="MsoNormal" style="color:black;mso-margin-top-alt:auto;mso-margin-bottom-alt:auto;mso-list:l2 level1 lfo1">
<b><span style="font-size:12.0pt">Hold MPI processes</span></b><span style="font-size:12.0pt"> for the tool to attach to them and to release them when attached.<br>
Q: Where are processes held? In MPI_Init or _start? <o:p></o:p></span></li><li class="MsoNormal" style="color:black;mso-margin-top-alt:auto;mso-margin-bottom-alt:auto;mso-list:l2 level1 lfo1">
<b><span style="font-size:12.0pt">Spawn tool daemon</span></b><span style="font-size:12.0pt"> on nodes where job is running.<br>
Q: Co-spawn or separate?<br>
Q: One per node or one per process?<br>
Q: Environment? Same general environment as MPI processes instead of restricted environment (e.g. $HOME not set or chroot).<o:p></o:p></span></li><li class="MsoNormal" style="color:black;mso-margin-top-alt:auto;mso-margin-bottom-alt:auto;mso-list:l2 level1 lfo1">
<b><span style="font-size:12.0pt">Acquire the process table</span></b><span style="font-size:12.0pt"> (rank, hostname, pid and executable path) of spawned MPI processes.<br>
Q: Only global proctable or additionally local (per node) proctable? <o:p></o:p></span></li><li class="MsoNormal" style="color:black;mso-margin-top-alt:auto;mso-margin-bottom-alt:auto;mso-list:l2 level1 lfo1">
<span style="font-size:12.0pt;color:#757B80">[Optional]</span><span style="font-size:12.0pt">
<b>Modify the environment</b> of the MPI processes before launching, such as prepending to LD_PRELOAD or LD_LIBRARY_PATH to inject preloads into the MPI processes (but not other processes, such as MPI daemons or tool daemons).<br>
Q: When? It would be great if modifying the environment could be done just before the MPI processes are forked/exec’ed. Why? For our profiler MAP we need to preload an MPI specific PMPI library, but for some “MPI” starter processes such as srun we don’t know
the real MPI implementation that is used. Acquiring a partial process table (no PIDs) and inspecting the binaries pointed to by the executable paths, could allow us to detect the MPI implementation.<o:p></o:p></span></li><li class="MsoNormal" style="color:black;mso-margin-top-alt:auto;mso-margin-bottom-alt:auto;mso-list:l2 level1 lfo1">
<span style="font-size:12.0pt;color:#757B80">[Optional]</span><span style="font-size:12.0pt">
<b>Raise queue allocation request and granted events</b> to allow the tool to disable startup timeouts temporarily while a queue allocation is in progress, as this can take a long time (applicable to srun).
<o:p></o:p></span></li><li class="MsoNormal" style="color:black;mso-margin-top-alt:auto;mso-margin-bottom-alt:auto;mso-list:l2 level1 lfo1">
<span style="font-size:12.0pt;color:#757B80">[Optional]</span><span style="font-size:12.0pt">
<b>Scalable startup of tool daemons and shipping of preloads</b> without touching the parallel file system on compute nodes. For example, pushing of daemon executable file (and dependencies plus preloads) to ram disk on compute nodes or Spindle?<br>
Q: Where files are pushed? A job specific temporary directory such as /tmp/mpi.job.1234/... or configurable?<br>
Q: How can the tool query the location of pushed files to reference them?<br>
Q: Who cleans up the files afterwards? The MPI job/starter itself or the tool?<br>
N: Files should be pushed with original file’s permissions. <o:p></o:p></span></li></ul>
<p class="MsoNormal"><span style="font-size:12.0pt;color:black"><br>
NB: Optional requirement = A tool could ultimately work without it, but I very much would like to see it supported.
<br>
<br>
In PMIx this is the “indirect” use case and Ralph Castain and I have been working together since a while to make sure this use case will be supported by PMIx (excluding some optional requirements for now).<o:p></o:p></span></p>
</div>
<div>
<p class="MsoNormal" style="margin-bottom:12.0pt"><span style="font-size:12.0pt;color:black"><br>
<i>Additional questions/notes:</i> <o:p></o:p></span></p>
<ul type="disc">
<li class="MsoNormal" style="color:black;mso-margin-top-alt:auto;mso-margin-bottom-alt:auto;mso-list:l3 level1 lfo2">
<span style="font-size:12.0pt">How will the handshake work, such that the MPI starter knows it's running under a tool and when it's possible for a tool to interact with the MPI starter process?
<o:p></o:p></span></li><li class="MsoNormal" style="color:black;mso-margin-top-alt:auto;mso-margin-bottom-alt:auto;mso-list:l3 level1 lfo2">
<span style="font-size:12.0pt">The handshake must support cases where the MPI starter filename that is provided by the user is a wrapper around the real MPI starter executable, for example XALT. <o:p></o:p></span></li><li class="MsoNormal" style="color:black;mso-margin-top-alt:auto;mso-margin-bottom-alt:auto;mso-list:l3 level1 lfo2">
<span style="font-size:12.0pt">In PMIx both problems are solved with PMIX_LAUNCHER_PAUSE_FOR_TOOL=1 and PMIX_LAUNCHER_RENDEZVOUS_FILE=<filename>.<o:p></o:p></span></li><li class="MsoNormal" style="color:black;mso-margin-top-alt:auto;mso-margin-bottom-alt:auto;mso-list:l3 level1 lfo2">
<span style="font-size:12.0pt">Will only the tool or also the tool daemons interact with the MPI job?<o:p></o:p></span></li><li class="MsoNormal" style="color:black;mso-margin-top-alt:auto;mso-margin-bottom-alt:auto;mso-list:l3 level1 lfo2">
<span style="font-size:12.0pt">Security, for example USER B shall not be able to attach to MPI job of USER A.<o:p></o:p></span></li><li class="MsoNormal" style="color:black;mso-margin-top-alt:auto;mso-margin-bottom-alt:auto;mso-list:l3 level1 lfo2">
<span style="font-size:12.0pt">Anything to consider for MPMD or heterogeneous systems?<o:p></o:p></span></li><li class="MsoNormal" style="color:black;mso-margin-top-alt:auto;mso-margin-bottom-alt:auto;mso-list:l3 level1 lfo2">
<span style="font-size:12.0pt">Must be scalable.<o:p></o:p></span></li><li class="MsoNormal" style="color:black;mso-margin-top-alt:auto;mso-margin-bottom-alt:auto;mso-list:l3 level1 lfo2">
<span style="font-size:12.0pt">Must not require a debugger. <o:p></o:p></span></li></ul>
<p class="MsoNormal" style="margin-bottom:12.0pt"><span style="font-size:12.0pt;color:black"><br>
<b>Use case 2: Attach to a running MPI job with a tool. </b><br>
<br>
This use case is a subset of use case 1 with the following requirements: <o:p></o:p></span></p>
<ul type="disc">
<li class="MsoNormal" style="color:black;mso-margin-top-alt:auto;mso-margin-bottom-alt:auto;mso-list:l0 level1 lfo3">
<span style="font-size:12.0pt">Acquire the process table of spawned MPI processes of MPI job. <o:p></o:p></span></li><li class="MsoNormal" style="color:black;mso-margin-top-alt:auto;mso-margin-bottom-alt:auto;mso-list:l0 level1 lfo3">
<span style="font-size:12.0pt">Spawn tool daemon on nodes where MPI job is running.
<o:p></o:p></span></li><li class="MsoNormal" style="color:black;mso-margin-top-alt:auto;mso-margin-bottom-alt:auto;mso-list:l0 level1 lfo3">
<span style="font-size:12.0pt;color:#757B80">[Optional]</span><span style="font-size:12.0pt"> Scalable startup of tool daemons without touching the file system.
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<p class="MsoNormal"><span style="font-size:12.0pt;color:black"><o:p> </o:p></span></p>
<p><span style="font-size:12.0pt;color:black">Thanks,<o:p></o:p></span></p>
<p><span style="font-size:12.0pt;color:black">Dirk<o:p></o:p></span></p>
<p><span style="font-size:12.0pt;color:black"><o:p> </o:p></span></p>
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<p class="MsoNormal"><b><span style="font-size:10.0pt;color:black">Dirk Schubert | Arm |</span></b><span style="font-size:10.0pt;color:black"> Staff Software Engineer </span><span style="font-size:12.0pt;color:black"><o:p></o:p></span></p>
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<p class="MsoNormal"><span style="font-size:10.0pt;color:black"><a href="mailto:dirk.schubert@arm.com">dirk.schubert@arm.com</a></span><span style="font-size:12.0pt;color:black"><o:p></o:p></span></p>
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<p><b><span style="font-size:10.0pt;color:#3A5979">allinea</span></b><b><span style="font-size:10.0pt;color:black">
</span></b><span style="font-size:10.0pt;color:gray">is now part of<b> </b></span><b><span style="font-size:10.0pt;color:#138DAC">Arm</span></b><span style="font-size:10.0pt;color:black"><o:p></o:p></span></p>
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<p class="MsoNormal"><b><span style="color:black">From:</span></b><span style="color:black"> mpiwg-tools <<a href="mailto:mpiwg-tools-bounces@lists.mpi-forum.org">mpiwg-tools-bounces@lists.mpi-forum.org</a>> on behalf of Mohror, Kathryn via mpiwg-tools <<a href="mailto:mpiwg-tools@lists.mpi-forum.org">mpiwg-tools@lists.mpi-forum.org</a>><br>
<b>Sent:</b> 17 March 2019 14:46<br>
<b>To:</b> <a href="mailto:mpiwg-tools@lists.mpi-forum.org">mpiwg-tools@lists.mpi-forum.org</a><br>
<b>Cc:</b> Mohror, Kathryn<br>
<b>Subject:</b> [mpiwg-tools] Meeting March 21, 2019</span><span style="font-size:12.0pt;color:black">
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<p class="MsoNormal"><span style="font-size:12.0pt;color:black"> <o:p></o:p></span></p>
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<p class="xmsonormal"><span style="font-size:12.0pt;color:black">Hey everybody,<o:p></o:p></span></p>
<p class="xmsonormal"><span style="font-size:12.0pt;color:black"> <o:p></o:p></span></p>
<p class="xmsonormal"><span style="font-size:12.0pt;color:black">For our call this Thursday (3/21) we’ll come back to debugger topics again. The call is at the usual time in the US (8 am Pacific/ 11 am Eastern / 4 pm CET) but note that the US has moved to DST
but I don’t think the EU has done so yet. <o:p></o:p></span></p>
<p class="xmsonormal"><span style="font-size:12.0pt;color:black"> <o:p></o:p></span></p>
<p class="xmsonormal"><span style="font-size:12.0pt;color:black"> <o:p></o:p></span></p>
<p class="xmsonormal"><span style="font-size:12.0pt;color:black">Webex Info:<o:p></o:p></span></p>
<p class="xmsonormal"><span style="font-size:12.0pt;color:black"> <a href="https://apps.fz-juelich.de/scalasca/mpiwg-tools-webex/index.php">
https://apps.fz-juelich.de/scalasca/mpiwg-tools-webex/index.php</a><o:p></o:p></span></p>
<p class="xmsonormal"><span style="font-size:12.0pt;color:black"> <o:p></o:p></span></p>
<p class="xmsonormal"><span style="font-size:12.0pt;color:black">Agenda:<o:p></o:p></span></p>
<p class="xmsonormal"><span style="font-size:12.0pt;color:black"> <o:p></o:p></span></p>
<p class="xmsonormal"><span style="font-size:12.0pt;color:black">In the last debugger call, I said that the plan for this meeting would be to get an overview of OMPD and start talking about analogous interfaces for MPI (e.g. revamp MQD). However, in the meantime,
I was convinced that we should focus on process acquisition first. So, the plan will be to talk about process acquisition in this meeting. I’ll go through our notes from 2017(ish) to hopefully find the straw men we drafted back then. Please bring your use
cases and any ideas you have on this front.<o:p></o:p></span></p>
<p class="xmsonormal"><span style="font-size:12.0pt;color:black"> <o:p></o:p></span></p>
<p class="xmsonormal"><span style="font-size:12.0pt;color:black">_________________________________________________________________<o:p></o:p></span></p>
<p class="xmsonormal"><span style="font-size:12.0pt;color:black">Kathryn Mohror, <a href="mailto:kathryn@llnl.gov">
kathryn@llnl.gov</a>, <a href="https://people.llnl.gov/kathryn">https://people.llnl.gov/kathryn</a><o:p></o:p></span></p>
<p class="xmsonormal"><span style="font-size:12.0pt;color:black"><a href="https://computation.llnl.gov/casc/data-analysis-group">Data Analysis Group</a> @ Lawrence Livermore National Laboratory, Livermore, CA, USA<o:p></o:p></span></p>
<p class="xmsonormal"><span style="font-size:12.0pt;color:black"> <o:p></o:p></span></p>
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